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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000901.1_2026_2807_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
2026 - 2807

Intron Length:
782

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTGAGGGGG

5'SS Class:
major

3'SS Sequence:
CCTCCCTGCTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GGCTGAG

U12 Branch Point Sequence:
CGGGGCTGAGCC

Flanking Amino Acid:
LTAGGFSHSDATLSRRQKRL

Intron Amino Acid Position:
185

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.4
0.55
1
55.1
43.9

Major BPS
43.9
-0.3
1.6
36.8
44.4

Major PPT
70.3
0.46
0.9
68.1
32

Minor 5ss
23.7
-3
3.3
29.1
43.5

Minor BPS
39.7
-0.8
2
43.46
44

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01000901.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 2987
2967