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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000901.1_2026_2857_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2026 - 2857

Intron Length:

832

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGGGGG

5'SS Class:

major

3'SS Sequence:

GCGCATCCGGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCGCAT

U12 Branch Point Sequence:

GGCGCCAGAAGC

Flanking Amino Acid:

LTAGGFSHSDEGGQAPPEPG

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

55.1

43.9

Major BPS

54.8

0.12

1.5

65.3

43.7

Major PPT

56.6

0.15

1.1

50.4

Minor 5ss

23.7

-3

3.3

29.1

43.5

Minor BPS

40.8

-0.7

45.69

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030286

Chromosome:

PEDO01000901.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035676

707 - 2987

2281