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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000902.1_3768_4592_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3768 - 4592

Intron Length:

825

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGGCCC

5'SS Class:

major

3'SS Sequence:

GCCATCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAT

U12 Branch Point Sequence:

CGACCCCCATCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.2

54.6

Major BPS

48.9

-0

1.3

39.1

Major PPT

65.3

0.34

0.9

57.8

33.1

Minor 5ss

30.5

-2.2

3.4

34.3

41.5

Minor BPS

40.5

-0.7

47.03

41.3

Associated Gene:

Gene:

SLC4A1

Ensembl Gene ID:

ENSAPLG00000025418

Chromosome:

PEDO01000902.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028726

21 - 4777

4757