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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000909.1_2799_3605_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2799 - 3605

Intron Length:

807

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCAGAA

U12 Branch Point Sequence:

TGATGCAGAAAA

Flanking Amino Acid:

FELLDYIVNEPPPKLPNGVF

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

81.3

32.8

Major BPS

49.9

-0

1.1

46.7

38.9

Major PPT

0.81

0.7

80.8

24.4

Minor 5ss

31.8

-2.1

3.6

48.2

47.9

Minor BPS

43.3

-0.5

2.1

56.86

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011045

Chromosome:

PEDO01000909.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011512

114 - 5255

5142