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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000909.1_3657_5087_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3657 - 5087

Intron Length:

1431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAATAAA

5'SS Class:

major

3'SS Sequence:

TCTTGGTGGGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGAGAA

U12 Branch Point Sequence:

GCTTTGAGAAGG

Flanking Amino Acid:

GVFTQDFQEFRAAACPRGVL

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.1

71.3

33.5

Major BPS

54.8

0.12

1.2

52.7

43.2

Major PPT

-0.1

1.8

53.2

45.9

Minor 5ss

-1.5

2.9

47.6

42.5

Minor BPS

-1.2

2.3

41.08

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011045

Chromosome:

PEDO01000909.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011512

114 - 5255

5142