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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000956.1_1612_1764_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1612 - 1764

Intron Length:

153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TCCCCTCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTAAC

U12 Branch Point Sequence:

GCAGCCGTAACG

Flanking Amino Acid:

PELWCHPACRVGQCVVVFSQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

66.6

39.6

Major BPS

49.8

-0

1.2

52.9

39.1

Major PPT

77.9

0.63

0.7

31.5

Minor 5ss

27.1

-2.6

26.2

36.9

Minor BPS

47.8

-0.3

2.2

52.58

47.7

Associated Gene:

Gene:

FBXO42

Ensembl Gene ID:

ENSAPLG00000027452

Chromosome:

PEDO01000956.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022602

374 - 3261

2888