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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000956.1_1882_2313_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1882 - 2313

Intron Length:

432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTATC

5'SS Class:

major

3'SS Sequence:

CTTTTCTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CTTTTCTTCACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

79.3

34.5

Major BPS

72.7

0.56

30.1

Major PPT

87.9

0.85

0.7

83.3

25.1

Minor 5ss

42.5

-0.8

2.8

60.5

37.7

Minor BPS

68.5

0.58

1.7

78.35

38.8

Associated Gene:

Gene:

FBXO42

Ensembl Gene ID:

ENSAPLG00000027452

Chromosome:

PEDO01000956.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022602

374 - 3261

2888