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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000960.1_2393_4244_F

Intron Information:

Intron Rank:

135626

Intron Class:

major

Intron Phase:

Intron Coordinates:

2393 - 4244

Intron Length:

1852

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTAATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCTAA

U12 Branch Point Sequence:

TTTTCTCTAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.1

77.3

37.8

Major BPS

0.05

1.3

52.7

42.7

Major PPT

78.3

0.64

0.9

78.9

33.3

Minor 5ss

32.4

-2

2.5

39.5

Minor BPS

71.8

0.66

1.6

82.86

30.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022981

Chromosome:

PEDO01000960.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045345

2366 - 5244

2879