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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001000.1_1804_3898_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1804 - 3898

Intron Length:

2095

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCGTAGGGG

5'SS Class:

weak_major

3'SS Sequence:

ATTTGGGGCTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TTGTTCATGATT

Flanking Amino Acid:

VSVYAGTATRPLILGPNPSF

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.6

0.04

1.3

44.2

40.7

Major BPS

84.8

0.86

85.7

34.9

Major PPT

45.9

-0.2

1.7

50.2

47.5

Minor 5ss

17.9

-3.7

3.9

19.1

38.2

Minor BPS

61.2

0.43

1.6

79.17

37.4

Associated Gene:

Gene:

NANOS3

Ensembl Gene ID:

ENSAPLG00000016829

Chromosome:

PEDO01001000.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048205

534 - 4051

3518