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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001011.1_1238_1414_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1238 - 1414

Intron Length:

177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCCCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CCGCTCTCACCC

Flanking Amino Acid:

GVVDANTAAQSGVGLARAHF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

69.9

40.9

Major BPS

72.7

0.56

30.1

Major PPT

85.7

0.8

0.7

81.5

23.5

Minor 5ss

34.4

-1.8

45.5

42.5

Minor BPS

43.9

-0.4

1.8

46.88

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022127

Chromosome:

PEDO01001011.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024946

3 - 1548

1546