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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001011.1_684_1080_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

684 - 1080

Intron Length:

397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCCG

5'SS Class:

strong_major

3'SS Sequence:

TCGTTGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

AATTATTTATCG

Flanking Amino Acid:

AFVDFVEKEKEPNNEKTNNG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

69.1

41.8

Major BPS

88.7

0.96

0.8

36.5

Major PPT

79.1

0.66

0.9

72.9

37.4

Minor 5ss

36.2

-1.6

2.9

43.1

37.6

Minor BPS

-0

1.8

60.02

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022127

Chromosome:

PEDO01001011.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024946

3 - 1548

1546