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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001017.1_2616_3637_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2616 - 3637

Intron Length:

1022

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGCGAT

U12 Branch Point Sequence:

TGTGCAGCGATG

Flanking Amino Acid:

DTYPNDEATERVFPYISAMV

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.9

30.1

Major BPS

45.4

-0.2

1.3

39.5

40.8

Major PPT

76.3

0.59

0.8

69.7

Minor 5ss

-2.1

2.8

42.5

44.3

Minor BPS

36.9

-1.1

2.3

44.33

Associated Gene:

Gene:

LMAN2

Ensembl Gene ID:

ENSAPLG00000010763

Chromosome:

PEDO01001017.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011233

560 - 4706

4147