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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001017.1_4487_4556_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4487 - 4556

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATAAC

U12 Branch Point Sequence:

GTCCCTATAACT

Flanking Amino Acid:

PSVSLLKSPKDNVDDPTGNF

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

65.6

0.39

1.1

67.7

34.6

Major PPT

83.2

0.75

0.7

77.4

24.6

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

59.6

0.38

1.6

75.24

41.2

Associated Gene:

Gene:

LMAN2

Ensembl Gene ID:

ENSAPLG00000010763

Chromosome:

PEDO01001017.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011233

560 - 4706

4147