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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001025.1_1222_1422_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1222 - 1422

Intron Length:

201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGATG

5'SS Class:

major

3'SS Sequence:

ATACTTGCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TGAGTTTGAATT

Flanking Amino Acid:

FREIMNDIPIRLSRIKFREE

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

66.4

44.6

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

69.2

0.43

66.1

Minor 5ss

34.9

-1.7

3.4

48.5

47.3

Minor BPS

50.8

0.1

1.5

65.63

39.4

Associated Gene:

Gene:

PCIF1

Ensembl Gene ID:

ENSAPLG00000014017

Chromosome:

PEDO01001025.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014627

1 - 4322

4322