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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001025.1_1571_1809_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1571 - 1809

Intron Length:

239

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TATGCTTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

ATTGATTTGACC

Flanking Amino Acid:

HYRELCQQREGIDPPRESFN

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

84.9

25.9

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

79.1

0.65

0.9

41.1

Minor 5ss

41.5

-0.9

2.7

53.7

43.5

Minor BPS

57.2

0.21

1.6

68.61

37.1

Associated Gene:

Gene:

PCIF1

Ensembl Gene ID:

ENSAPLG00000014017

Chromosome:

PEDO01001025.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045601

455 - 4322

3868

ENSAPLT00000014627

1 - 4322

4322