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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001025.1_2334_3268_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2334 - 3268

Intron Length:

935

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TCTACACACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

TCATCTTCTACA

Flanking Amino Acid:

PSGNSVKKPKVDVPGNPAAQ

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.8

43.8

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

64.8

0.33

55.4

39.3

Minor 5ss

-2.2

3.2

46.1

Minor BPS

51.2

0.03

1.9

64.05

42.2

Associated Gene:

Gene:

PCIF1

Ensembl Gene ID:

ENSAPLG00000014017

Chromosome:

PEDO01001025.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045601

455 - 4322

3868

ENSAPLT00000014627

1 - 4322

4322