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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001025.1_3407_3876_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3407 - 3876

Intron Length:

470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TGGACACTCTTAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

GTTGTTTGGACA

Flanking Amino Acid:

MPVLGQHDVISDPLGLNAAP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

76.1

32.7

Major BPS

77.9

0.69

0.8

75.9

Major PPT

59.8

0.22

0.9

55.6

40.2

Minor 5ss

38.6

-1.3

2.8

51.7

39.2

Minor BPS

49.8

-0

1.6

62.79

37.6

Associated Gene:

Gene:

PCIF1

Ensembl Gene ID:

ENSAPLG00000014017

Chromosome:

PEDO01001025.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045601

455 - 4322

3868

ENSAPLT00000014627

1 - 4322

4322