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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001025.1_4002_4198_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4002 - 4198

Intron Length:

197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGGCT

5'SS Class:

major

3'SS Sequence:

CCTGTCCTCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

TTGTCCTGACTC

Flanking Amino Acid:

KPMRLVQDLPDELVQAGWEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

63.5

40.9

Major BPS

68.9

0.47

59.2

39.1

Major PPT

0.58

0.8

72.7

32.1

Minor 5ss

30.9

-2.2

3.7

48.2

47.4

Minor BPS

59.5

0.28

1.8

70.97

40.8

Associated Gene:

Gene:

PCIF1

Ensembl Gene ID:

ENSAPLG00000014017

Chromosome:

PEDO01001025.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045601

455 - 4322

3868

ENSAPLT00000014627

1 - 4322

4322