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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001025.1_632_1137_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

632 - 1137

Intron Length:

506

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGAGTT

5'SS Class:

major

3'SS Sequence:

CTGTTTTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTGCAC

U12 Branch Point Sequence:

TCTGGGTTAAGT

Flanking Amino Acid:

AEAAKRLIESRSASPDSRKV

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

35.2

Major BPS

48.9

-0

1.5

63.1

44.5

Major PPT

80.2

0.68

0.9

76.3

37.7

Minor 5ss

29.5

-2.3

3.7

46.1

49.1

Minor BPS

43.7

-0.4

2.6

66.67

Associated Gene:

Gene:

PCIF1

Ensembl Gene ID:

ENSAPLG00000014017

Chromosome:

PEDO01001025.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014627

1 - 4322

4322