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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001025.1_89_164_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

89 - 164

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAACCTT

5'SS Class:

weak_major

3'SS Sequence:

TTTTGCCTTTGAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAA

U12 Branch Point Sequence:

CATTCTTTAACC

Flanking Amino Acid:

ILKENNISGTHLSSPQTHSF

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.5

0.27

1.1

60.1

44.6

Major BPS

74.7

0.61

65.9

40.9

Major PPT

0.36

1.7

77.7

36.7

Minor 5ss

45.4

-0.5

3.3

70.6

40.6

Minor BPS

79.5

0.91

1.1

79.29

Associated Gene:

Gene:

PCIF1

Ensembl Gene ID:

ENSAPLG00000014017

Chromosome:

PEDO01001025.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014627

1 - 4322

4322