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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001033.1_1349_1518_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1349 - 1518

Intron Length:

170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGGCTC

5'SS Class:

major

3'SS Sequence:

GGTGGCCGTGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGGACAT

U12 Branch Point Sequence:

GGACGAGGGACA

Flanking Amino Acid:

LLDNYSDRIQVLQNMVHCAD

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.2

0.41

1.3

59.9

44.9

Major BPS

43.9

-0.3

1.4

46.4

Major PPT

59.5

0.21

1.1

50.7

43.9

Minor 5ss

30.3

-2.3

3.5

41.7

45.1

Minor BPS

30.9

-1.5

2.2

36.36

33.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027403

Chromosome:

PEDO01001033.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036244

21 - 3645

3625