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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001035.1_1073_2413_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1073 - 2413

Intron Length:
1341

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACA|GTAAGAGCT

5'SS Class:
major

3'SS Sequence:
TCTCTCACCACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATCTCAT

U12 Branch Point Sequence:
CCTCTCTCACCA

Flanking Amino Acid:
REKNPWICQNTPSSQMVLMT

Intron Amino Acid Position:
383

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.1
0.52
1
66.6
37.3

Major BPS
86.1
0.9
0.7
85.7
22.9

Major PPT
75.5
0.57
0.8
69.4
29.7

Minor 5ss
35.3
-1.7
3.5
54.4
43.3

Minor BPS
46.9
-0.2
1.8
56.1
43.3

Associated Gene:

Gene:
LRRC73

Ensembl Gene ID:

Chromosome:
PEDO01001035.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 6203
6183

21 - 6203
6183