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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001047.1_1325_1435_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1325 - 1435

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTGAG

U12 Branch Point Sequence:

GTTTCCTTGAGC

Flanking Amino Acid:

SNCIVPWLELHDTCPVCRKS

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

72.2

37.2

Major BPS

-0

1.6

48.7

45.1

Major PPT

89.9

0.9

0.7

84.9

29.9

Minor 5ss

-2.1

3.6

44.7

44.3

Minor BPS

71.5

0.66

1.6

78.74

Associated Gene:

Gene:

RNF115

Ensembl Gene ID:

ENSAPLG00000016938

Chromosome:

PEDO01001047.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033585

1143 - 4545

3403