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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001047.1_2600_3728_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2600 - 3728

Intron Length:

1129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

GTTGTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTACAT

U12 Branch Point Sequence:

GCCCCCCCAAGT

Flanking Amino Acid:

APRLAAPLLLLLGQLENTGP

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

36.6

Major BPS

58.8

0.22

1.2

66.8

39.9

Major PPT

83.2

0.75

0.9

77.1

37.1

Minor 5ss

30.8

-2.2

2.6

33.6

35.6

Minor BPS

42.1

-0.5

2.1

55.17

46.1

Associated Gene:

Gene:

RNF115

Ensembl Gene ID:

ENSAPLG00000016938

Chromosome:

PEDO01001047.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033585

1143 - 4545

3403