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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001047.1_3801_4078_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3801 - 4078

Intron Length:

278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CGTTGCTCACCC

Flanking Amino Acid:

APRQVSGHRGDNPADLRGVF

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.3

35.8

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

72.9

0.52

0.9

69.8

36.6

Minor 5ss

28.1

-2.5

27.7

36.2

Minor BPS

45.8

-0.3

2.2

59.01

45.8

Associated Gene:

Gene:

RNF115

Ensembl Gene ID:

ENSAPLG00000016938

Chromosome:

PEDO01001047.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033585

1143 - 4545

3403