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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001061.1_5083_5921_R

Intron Information:

Intron Rank:
2
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
5083 - 5921
Intron Length:
839

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TGG|GTAATGTAG
5'SS Class:
major
3'SS Sequence:
TTTGACTTTCCAG|A
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTTTGAC
U12 Branch Point Sequence:
TTTTTTTTGACT
Flanking Amino Acid:
CIMYRGFDYLDGLEHVSEIK
Intron Amino Acid Position:
105

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
69.4
0.46
1.1
59.4
42
Major BPS
86.5
0.91
0.8
77.4
37.4
Major PPT
82.7
0.74
0.9
73.6
41.5
Minor 5ss
35.7
-1.6
3.2
38.2
46.8
Minor BPS
82
1.09
0.9
94.3
25.7

Associated Gene:

Gene:
DMAC2L
Ensembl Gene ID:
ENSAPLG00000025056
Chromosome:
PEDO01001061.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000041222
2691 - 7666
4976