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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001136.1_10018_10429_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10018 - 10429

Intron Length:

412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTCAT

U12 Branch Point Sequence:

TGGGCCTCATTC

Flanking Amino Acid:

EEQMIVLPKTE*

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

69.1

35.7

Major BPS

64.6

0.36

1.3

67.6

40.6

Major PPT

88.9

0.88

0.7

36.6

Minor 5ss

31.2

-2.1

3.3

40.6

45.1

Minor BPS

46.5

-0.2

1.9

55.03

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028297

Chromosome:

PEDO01001136.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032648

5968 - 11434

5467