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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001136.1_689_2847_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

689 - 2847

Intron Length:

2159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGTAACCA

5'SS Class:

weak_major

3'SS Sequence:

TGAATCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

GAGTTCTGAATC

Flanking Amino Acid:

IPMGGNLSSPTS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.6

0.13

1.1

49.4

34.6

Major BPS

82.1

0.8

71.6

36.4

Major PPT

70.7

0.47

39.2

Minor 5ss

34.7

-1.7

3.2

43.8

Minor BPS

57.5

0.22

1.4

60.89

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001920

Chromosome:

PEDO01001136.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001914

681 - 3844

3164