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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001153.1_1758_1890_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1758 - 1890

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCGGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GTTGTCTCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTAAA

U12 Branch Point Sequence:

CGCCGCTAAAGC

Flanking Amino Acid:

GDLRRMNKRQLYYQVLNFAM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

76.3

32.5

Major BPS

57.8

0.19

1.1

59.3

35.9

Major PPT

75.8

0.58

0.9

69.7

36.7

Minor 5ss

15.9

-3.9

3.7

25.2

37.3

Minor BPS

39.7

-0.8

2.2

43.75

44.2

Associated Gene:

Gene:

SEC11C

Ensembl Gene ID:

ENSAPLG00000030800

Chromosome:

PEDO01001153.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043242

53 - 1941

1889