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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001179.1_4196_5667_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4196 - 5667

Intron Length:

1472

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

CCATTTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCAAAA

U12 Branch Point Sequence:

TTTGCCCAAAAA

Flanking Amino Acid:

TKGRVCFEAKVTQHLPVKEG

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

72.1

39.1

Major BPS

47.3

-0.1

50.8

30.3

Major PPT

74.5

0.55

0.8

69.1

31.2

Minor 5ss

27.9

-2.5

3.2

39.3

46.1

Minor BPS

48.5

-0.1

2.2

69.28

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004162

Chromosome:

PEDO01001179.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004265

2617 - 12703

10087