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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001179.1_5759_6639_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5759 - 6639

Intron Length:

881

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

CTTTCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

GCATCTTTCACC

Flanking Amino Acid:

WSVDFSHSQLGEDELSYGYD

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

56.7

42.7

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

86.7

0.83

0.7

24.1

Minor 5ss

33.3

-1.9

35.1

Minor BPS

57.4

0.22

1.8

63.51

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004162

Chromosome:

PEDO01001179.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004265

2617 - 12703

10087