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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001179.1_9312_9392_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9312 - 9392

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGGAC

5'SS Class:

major

3'SS Sequence:

CCTCTTCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGATGAA

U12 Branch Point Sequence:

GAAGGCTCACCT

Flanking Amino Acid:

RAKRNFILDQCNVYNSGQRR

Intron Amino Acid Position:

428

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

63.5

Major BPS

-0.1

1.3

37.5

42.1

Major PPT

82.3

0.73

0.7

76.6

25.4

Minor 5ss

22.7

-3.1

3.5

30.5

43.7

Minor BPS

41.1

-0.5

2.2

55.02

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004162

Chromosome:

PEDO01001179.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004265

2617 - 12703

10087