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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001235.1_982_1343_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

982 - 1343

Intron Length:

362

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCGCAAGGT

5'SS Class:

weak_major

3'SS Sequence:

CCCTCGCCGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAACGAC

U12 Branch Point Sequence:

CCCCCCCGACCT

Flanking Amino Acid:

MGGVWGLLGLGEEFYREA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.8

0.04

1.3

51.9

41.5

Major BPS

44.3

-0.3

1.1

36.2

30.8

Major PPT

62.4

0.28

57.1

33.4

Minor 5ss

14.2

-4.1

3.8

20.4

37.6

Minor BPS

41.8

-0.5

54.6

46.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030268

Chromosome:

PEDO01001235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019738

225 - 1369

1145