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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001312.1_1573_1816_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1573 - 1816

Intron Length:

244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GCTCCCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

TGGTCCTGATGC

Flanking Amino Acid:

GSAIQHCHLQGPLEIGPGCL

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

73.2

37.5

Major BPS

79.7

0.74

79.6

35.6

Major PPT

71.7

0.49

0.8

65.2

30.5

Minor 5ss

31.6

-2.1

3.4

43.4

44.3

Minor BPS

47.8

-0.1

59.95

44.9

Associated Gene:

Gene:

FCSK

Ensembl Gene ID:

ENSAPLG00000004029

Chromosome:

PEDO01001312.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019413

21 - 5606

5586

ENSAPLT00000004147

21 - 5563

5543