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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001312.1_1988_2060_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1988 - 2060

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

GTGTCCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCGTAAC

U12 Branch Point Sequence:

TGGGGCGTAACC

Flanking Amino Acid:

TLSGRLDDWQSPAEASTYLN

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

37.5

Major BPS

47.7

-0.1

1.4

49.3

42.6

Major PPT

68.6

0.42

0.9

58.8

38.3

Minor 5ss

23.1

-3.1

3.2

27.7

44.2

Minor BPS

-0.4

2.4

58.38

46.5

Associated Gene:

Gene:

FCSK

Ensembl Gene ID:

ENSAPLG00000004029

Chromosome:

PEDO01001312.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019413

21 - 5606

5586

ENSAPLT00000004147

21 - 5563

5543