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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001312.1_2129_2301_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2129 - 2301

Intron Length:

173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTCATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TCTCCCTCATCC

Flanking Amino Acid:

WAEFFHRTGIREGDLWDAQT

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

73.8

0.54

0.9

65.4

35.2

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

55.2

0.14

1.9

68.26

Associated Gene:

Gene:

FCSK

Ensembl Gene ID:

ENSAPLG00000004029

Chromosome:

PEDO01001312.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019413

21 - 5606

5586

ENSAPLT00000004147

21 - 5563

5543