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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001312.1_3265_3340_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3265 - 3340

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCGTT

5'SS Class:

major

3'SS Sequence:

CGTGCCTCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

GAAAAAGGAGCC

Flanking Amino Acid:

AVCPARLDLSGGWSDTPPIT

Intron Amino Acid Position:

559

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

72.6

38.9

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

63.4

0.3

38.5

Minor 5ss

37.3

-1.4

3.6

56.2

Minor BPS

29.6

-1.5

34.03

32.7

Associated Gene:

Gene:

FCSK

Ensembl Gene ID:

ENSAPLG00000004029

Chromosome:

PEDO01001312.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019413

21 - 5606

5586

ENSAPLT00000004147

21 - 5563

5543