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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001312.1_3881_3955_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3881 - 3955

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTACGTCCT

5'SS Class:

major

3'SS Sequence:

CCCCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CTGCCCTGACCC

Flanking Amino Acid:

WSKLPHGSGLGTSSILAGAA

Intron Amino Acid Position:

683

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

66.5

44.9

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

70.9

0.47

0.7

64.7

23.9

Minor 5ss

35.3

-1.7

3.1

42.7

Minor BPS

49.6

-0

1.8

60.56

44.4

Associated Gene:

Gene:

FCSK

Ensembl Gene ID:

ENSAPLG00000004029

Chromosome:

PEDO01001312.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019413

21 - 5606

5586

ENSAPLT00000004147

21 - 5563

5543