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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001312.1_45897_46429_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

45897 - 46429

Intron Length:

533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCGGG

5'SS Class:

major

3'SS Sequence:

TAACCTGCCCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

CTTCCTTTAACC

Flanking Amino Acid:

KAQRKQQMAEEMVEAAGEDE

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

47.1

Major BPS

77.3

0.68

79.3

29.4

Major PPT

59.8

0.22

0.9

38.7

Minor 5ss

34.3

-1.8

3.6

46.4

Minor BPS

0.83

1.2

79.59

35.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004996

Chromosome:

PEDO01001312.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005183

44889 - 50481

5593