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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001312.1_46636_47471_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46636 - 47471

Intron Length:

836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TCACCCCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

GTTTTGTCACCC

Flanking Amino Acid:

VQLEQNEAAFSVAVCRFSNT

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

35.3

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

67.9

0.4

0.8

58.3

32.8

Minor 5ss

33.8

-1.8

2.9

43.7

43.6

Minor BPS

44.9

-0.4

2.4

62.67

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004996

Chromosome:

PEDO01001312.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005183

44889 - 50481

5593