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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001312.1_47629_48632_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47629 - 48632

Intron Length:

1004

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTCTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

GGTCTCACAGCC

Flanking Amino Acid:

GGEKLEFLHKTPVEEVPAAI

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

81.2

0.7

73.9

31.2

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

41.5

-0.6

1.9

51.01

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004996

Chromosome:

PEDO01001312.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005183

44889 - 50481

5593