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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001312.1_48759_49697_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48759 - 49697

Intron Length:

939

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGGCT

5'SS Class:

major

3'SS Sequence:

TCTCCCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAG

U12 Branch Point Sequence:

AAGCACTCAGCC

Flanking Amino Acid:

KKLLRKCENKHIANYICGIQ

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

63.5

40.9

Major BPS

50.8

0.02

1.5

37.5

Major PPT

75.5

0.57

0.7

69.5

24.3

Minor 5ss

30.9

-2.2

3.7

48.2

47.4

Minor BPS

43.2

-0.5

1.8

49.52

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004996

Chromosome:

PEDO01001312.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005183

44889 - 50481

5593