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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001312.1_622_713_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

622 - 713

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTCAC

5'SS Class:

major

3'SS Sequence:

TGTGCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAA

U12 Branch Point Sequence:

ACGGCCTCAACC

Flanking Amino Acid:

CAGPDGSVPLVCGVVFFSSD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

66.7

38.7

Major BPS

55.4

0.13

1.2

59.5

Major PPT

69.8

0.45

0.9

62.5

34.6

Minor 5ss

40.7

-1

2.8

49.5

41.3

Minor BPS

55.3

0.15

1.7

60.73

44.6

Associated Gene:

Gene:

FCSK

Ensembl Gene ID:

ENSAPLG00000004029

Chromosome:

PEDO01001312.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004147

21 - 5563

5543

ENSAPLT00000019413

21 - 5606

5586