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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001316.1_1822_2205_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1822 - 2205

Intron Length:

384

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCG|GCCGTGAGT

5'SS Class:

weak_major

3'SS Sequence:

GGGCGTGGCTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCTAAG

U12 Branch Point Sequence:

GCGGGGCTAAGG

Flanking Amino Acid:

QALKGFRNAPGCGRGLGVWA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.6

0.02

1.4

54.9

42.3

Major BPS

45.1

-0.3

1.7

49.3

44.7

Major PPT

48.6

-0

42.3

43.2

Minor 5ss

18.2

-3.7

3.8

31.3

42.6

Minor BPS

29.2

-1.7

2.4

27.54

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024315

Chromosome:

PEDO01001316.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043783

543 - 2253

1711