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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001318.1_1087_1615_R

Intron Information:

Intron Rank:

147956

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1087 - 1615

Intron Length:

529

Sequence Information:

Terminal Dinucleotides:

GC-GG

5'SS Sequence:

CCG|GCGGGGTTC

5'SS Class:

major

3'SS Sequence:

CCCCAAATCCTGG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

ACACCCCAAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.4

0.34

1.3

61.9

40.2

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

-0.8

3.1

39.2

32.3

Minor 5ss

24.6

-2.9

4.3

40.4

46.2

Minor BPS

44.9

-0.4

1.9

51.8

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026900

Chromosome:

PEDO01001318.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047178

21 - 1639

1619