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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001345.1_3397_3505_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3397 - 3505

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

GTCCCCTGCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCCCAT

U12 Branch Point Sequence:

GCTACCCCATGT

Flanking Amino Acid:

DKKLAELRMEMERLQAENAA

Intron Amino Acid Position:

322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

50.9

0.02

1.3

60.4

37.5

Major PPT

65.5

0.35

38.6

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

38.5

-0.7

2.2

54.56

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005216

Chromosome:

PEDO01001345.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005393

167 - 7766

7600