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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001411.1_11099_11197_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11099 - 11197

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GCTTTGTGCAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

TGGATGTTAACA

Flanking Amino Acid:

DKQQLDEKLKKKDFEISQIQ

Intron Amino Acid Position:

908

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

35.3

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

58.1

0.18

1.2

58.4

41.2

Minor 5ss

-1.4

3.3

49.5

41.1

Minor BPS

0.03

2.1

64.26

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011970

Chromosome:

PEDO01001411.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016357

52 - 19127

19076

ENSAPLT00000012500

52 - 19059

19008

ENSAPLT00000012498

52 - 19059

19008

ENSAPLT00000008943

52 - 19059

19008