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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001411.1_14866_15169_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

14866 - 15169

Intron Length:

304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACATGCC

5'SS Class:

major

3'SS Sequence:

AGAACACGAAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

CTCTCTAGAACA

Flanking Amino Acid:

EIQAALEEAEGKILRLQLEL

Intron Amino Acid Position:

1397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

67.8

38.7

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

39.5

-0.6

1.6

29.4

35.5

Minor 5ss

32.2

-2

3.4

44.7

43.3

Minor BPS

51.7

0.05

1.8

64.78

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011970

Chromosome:

PEDO01001411.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012500

52 - 19059

19008