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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001411.1_5221_5333_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5221 - 5333

Intron Length:

113

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTA|GCAAACAGT

5'SS Class:

weak_major

3'SS Sequence:

TTCTTTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCATTAT

U12 Branch Point Sequence:

GCTGCATTATTC

Flanking Amino Acid:

VTKGQTVQQVVNNSVGALAK

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.7

0.11

1.3

61.4

42.8

Major BPS

54.4

0.11

1.4

45.4

Major PPT

84.9

0.78

0.8

84.5

30.4

Minor 5ss

-2.1

4.1

49.7

42.1

Minor BPS

46.8

-0.2

1.9

55.83

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011970

Chromosome:

PEDO01001411.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012500

52 - 19059

19008