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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001411.1_5484_6236_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5484 - 6236

Intron Length:

753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGGAGC

5'SS Class:

major

3'SS Sequence:

TTACCCTGGGAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTCTTTTTACCC

Flanking Amino Acid:

LDIAGFEIFDFNSLEQLCIN

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

69.9

40.7

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

53.1

0.07

1.2

56.3

38.8

Minor 5ss

-1.7

3.2

47.6

41.5

Minor BPS

64.1

0.42

1.6

72.92

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011970

Chromosome:

PEDO01001411.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012498

52 - 19059

19008

ENSAPLT00000008943

52 - 19059

19008

ENSAPLT00000016357

52 - 19127

19076

ENSAPLT00000012500

52 - 19059

19008